BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020D08SP1|AL427619
(972 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig795 1133 0.0
3x_Contig1455 472 e-133
>3x_Contig795
Length = 2560
Score = 1133 bits (571), Expect = 0.0
Identities = 612/620 (98%), Gaps = 6/620 (0%)
Strand = Plus / Plus
Query: 349 aacgcaaaaaaattatcacagcaggtttattttgtcaatattgaaccgttaatcgatgct 408
||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 98 aacgcaaaaaaat-atcacagcaggtta--tttgtcaatatt-aaccgttaatcgatgct 153
Query: 409 tcattcgttggtcaatacgtccattatttcataaataaatggatggcattattgttcaat 468
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tcattcgt-ggtcaatacgtccattatttcataaataaatggatggcattattgttcaat 212
Query: 469 accttttctgaatgtattctactggatgcggactctgtgtcatttgccagtcttgaatcc 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 accttttctgaatgtattctactggatgcggactctgtgtcatttgccagtcttgaatcc 272
Query: 529 tattttgatttcaaaggttatcaggacactggcatgctgttattcagagacagaaatatt 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tattttgatttcaaaggttatcaggacactggcatgctgttattcagagacagaaatatt 332
Query: 589 ataggcgagaaaacttttatttattgtacagatacattaaagaagcttttcccgtctgta 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ataggcgagaaaacttttatttattgtacagatacattaaagaagcttttcccgtctgta 392
Query: 649 gaagaaacccatttcatgagccatagatctactttccccctcgaacttgtggagaatgat 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gaagaaacccatttcatgagccatagatctactttccccctcgaacttgtggagaatgat 452
Query: 709 aatatcaatatcgatactctatctatggaagagcagatatactataagttcttccataac 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aatatcaatatcgatactctatctatggaagagcagatatactataagttcttccataac 512
Query: 769 ttacaactacatcacatagatagtggattagttgtagttgatcgagttaaaaaattatct 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ttacaactacatcacatagatagtggattagttgtagttgatcgagttaaaaaattatct 572
Query: 829 agtctactcatctcaactatgatgaatatcgatggtaagcttcaaagatgcgtttacggc 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 agtctactcatctcaactatgatgaatatcgatggtaagcttcaaagatgcgtttacggc 632
Query: 889 gataaagaaatattttggcttggccaattgctcgccggagagaaatattctatawaccca 948
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 633 gataaagaaatattttggcttggccaattgctcgccggagagaaatattctatataccca 692
Query: 949 actgaagg-tccatcatggg 967
|||||||| |||||||||||
Sbjct: 693 actgaaggttccatcatggg 712
>3x_Contig1455
Length = 9095
Score = 472 bits (238), Expect = e-133
Identities = 417/473 (88%), Gaps = 4/473 (0%)
Strand = Plus / Minus
Query: 1 gatcttgaatcgagattattccctttcctctcaaagaagacaccattcagacatttgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 641 gatcttgaatcgagattattccctttcctctcaaagaagacaccattcagaaatttgtgg 582
Query: 61 cctaaaatgatacatgtcaatccttggacgttgattccttctttt--agtaacccattgt 118
| |||||||||| ||||||||||||||||||||||| || |||| ||||| |||||
Sbjct: 581 cataaaatgataaatgtcaatccttggacgttgattaattattttttagtaaaaaattgt 522
Query: 119 tagaaggtaaagacacctggaaaatggatgataattattcattcttctataattggaata 178
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tagaaggtaaagaaacctggaaaatggatgataattattcattcttctataattggaata 462
Query: 179 attttgcagaggggaagggaattgtactgacattggggctgaggcacggtgaccagttca 238
|||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |
Sbjct: 461 attttgcagaggggaagggaattgtactgaaattggggatgaggcacggtgaccagttaa 402
Query: 239 agaagttacttctcactttggagaattt-aaataatacacttccaatacaag-ttattca 296
|||||||| || | | |||||||||||| |||||||| |||| |||||||| |||||||
Sbjct: 401 agaagttaattataaatttggagaatttaaaataataaacttaaaatacaagtttattca 342
Query: 297 caacggatctgagcttactgaagccttcatttacgacattcattcattcttaaacgcaaa 356
|||||||| |||| ||| ||||| ||||||||||| ||| ||| ||| ||||| | |||
Sbjct: 341 caacggatatgagattaatgaagaattcatttacgaaattaattaattattaaaagaaaa 282
Query: 357 aaaattatcacagcaggtttattttgtcaatattgaaccgttaatcgatgcttcattcgt 416
||||| || | || ||||||||||||| ||||||||| |||||| |||| || ||| ||
Sbjct: 281 aaaataataaaagaaggtttattttgtaaatattgaaaagttaatagatgattaattagt 222
Query: 417 tggtcaatacgtccattatttcataaataaatggatggcattattgttcaata 469
|||| |||| || |||||| | |||||||||||||| |||||||| ||||
Sbjct: 221 tggtaaataagtaaattattaaaaaaataaatggatggatttattgttaaata 169
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8026
Number of Sequences: 1807
Number of extensions: 8026
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 2
length of query: 972
length of database: 10,358,551
effective HSP length: 16
effective length of query: 956
effective length of database: 10,329,639
effective search space: 9875134884
effective search space used: 9875134884
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)